BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032G03SP1|AL429619
(881 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1805 1738 0.0
3x_Contig1701 1291 0.0
3x_Contig1803 143 5e-34
>3x_Contig1805
Length = 19369
Score = 1738 bits (875), Expect = 0.0
Identities = 878/881 (99%)
Strand = Plus / Minus
Query: 1 gatcccaaacgattgtgggtaatcgtagtggggaccttgaccgttcaaaagggaaaagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9896 gatcccaaacgattgtgggtaatcgtagtggggaccttgaccgttcaaaagggaaaagat 9837
Query: 61 ggattcgtctgtkgtactgttgttgagggcataacagactgtgccgttatcctttgaaat 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9836 ggattcgtctgtggtactgttgttgagggcataacagactgtgccgttatcctttgaaat 9777
Query: 121 aggagccgcatgggtccctgatagtgataatwaacccaacagaatagatagcattattaa 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 9776 aggagccgcatgggtccctgatagtgataataaacccaacagaatagatagcattattaa 9717
Query: 181 cctgagcttgtttgaacctgcgtttttgatctgcttcatttttatgcaattgaataatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9716 cctgagcttgtttgaacctgcgtttttgatctgcttcatttttatgcaattgaataatac 9657
Query: 241 cttctattgttgtwatgaaggatcatcagtaaaccttgtctcatcacttgtgtgatgcgg 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9656 cttctattgttgtaatgaaggatcatcagtaaaccttgtctcatcacttgtgtgatgcgg 9597
Query: 301 ttcttatatgccaaatttctgtctgttcatacatctgaactcatctcgatgaacccacta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9596 ttcttatatgccaaatttctgtctgttcatacatctgaactcatctcgatgaacccacta 9537
Query: 361 cacgtgcgagtgtcatttagcattattggcggtatcctccaacgaatttccatcatctaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9536 cacgtgcgagtgtcatttagcattattggcggtatcctccaacgaatttccatcatctaa 9477
Query: 421 tcgatattcgagaatatagtctaaagggctcgagcagtcggctttattttacagccgcac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9476 tcgatattcgagaatatagtctaaagggctcgagcagtcggctttattttacagccgcac 9417
Query: 481 tttcttagaaagtatcacagaaagccacttttccaaccttacagagcttttctgatctgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9416 tttcttagaaagtatcacagaaagccacttttccaaccttacagagcttttctgatctgc 9357
Query: 541 aaattcagtgttcctttttcaaaatgcaacgaccctgaaaatactcgaatgccgtatgca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9356 aaattcagtgttcctttttcaaaatgcaacgaccctgaaaatactcgaatgccgtatgca 9297
Query: 601 cgtgtgtcaagtaggattcaaaccacttagacgaagcactttggcactcaacggcagtcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9296 cgtgtgtcaagtaggattcaaaccacttagacgaagcactttggcactcaacggcagtcc 9237
Query: 661 atgtcctgagaccccttccgagggaaaagcgttcaattcgcatctgaacccttactgccg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9236 atgtcctgagaccccttccgagggaaaagcgttcaattcgcatctgaacccttactgccg 9177
Query: 721 atgtgttagcataaaaacaaaacagcgtgtttcacacttccagtgctttgtctgtgcgga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9176 atgtgttagcataaaaacaaaacagcgtgtttcacacttccagtgctttgtctgtgcgga 9117
Query: 781 aactaaggaattaacaatcaagagtttttatatgcagcgtgtaaggttcaatattagggt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9116 aactaaggaattaacaatcaagagtttttatatgcagcgtgtaaggttcaatattagggt 9057
Query: 841 gtgcaagaacataaaccacacccaggtagcggaaaaggaaa 881
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 9056 gtgcaagaacataaaccacacccaggtagcggaaaaggaaa 9016
>3x_Contig1701
Length = 10926
Score = 1291 bits (650), Expect = 0.0
Identities = 769/806 (95%), Gaps = 6/806 (0%)
Strand = Plus / Minus
Query: 1 gatcccaaacgattgtgggtaatcgtagtggggaccttgaccgttcaaaagggaaaagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10082 gatcccaaacgattgtgggtaatcgtagtggggaccttgaccgttcaaaaggggaaagat 10023
Query: 61 ggattcgtctgtkgtactgttgttgagggcataacagactgtgccgttatcctttgaaat 120
|||||| ||||| |||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 10022 ggattcatctgtggtactgctgttgagggcataacagactgtgccgttgtcctttgaaat 9963
Query: 121 aggagccgcatgggtccctgatagtgataatwaacccaacagaatagatagcattattaa 180
||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||
Sbjct: 9962 aggagccgcatgggtccctgataatgataataaactcaacagaatagatagcattattaa 9903
Query: 181 cctgagcttgtttgaacctgcgtttttgatctgcttcatttttatgcaattgaataatac 240
||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 9902 cctgagcgggtttgaacctgcgtttttgatctgcttcttttttatgcaattgaataatac 9843
Query: 241 cttctattgttgtwatgaaggatcatcagtaaaccttgtctcatcacttgtgtgatgcgg 300
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9842 cttccattgttgtaatgaaggatcatcagtaaaccttgtctcatcacttgtgtgatgcgg 9783
Query: 301 ttcttatatgccaaatttctgtctgttcatacatctgaactcatctcgatgaacccacta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9782 ttcttatatgccaaatttctgtctgttcatacatctgaactcatctcgatgaacccacta 9723
Query: 361 cacgtgcgagtgtcatttagcattattggcggtatcctccaacgaatttccatcatctaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9722 cacgtgcgagtgtcatttagcattattggcggtatcctccaacgaatttccatcatctaa 9663
Query: 421 tcgatattcgagaatatagtctaaagggctcgagcagtcggctttattttacagccgcac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9662 tcgatattcgagaatatagtctaaagggctcgagcagtcggctttattttacagccgcac 9603
Query: 481 tttcttagaaagtatcacagaaagccacttttccaacctt-acagagcttttctgatctg 539
| | ||||||||| |||||||||||||||||||||||||| |||||| |||||||| ||
Sbjct: 9602 tcttttagaaagtgtcacagaaagccacttttccaaccttaacagagtttttctgaacta 9543
Query: 540 ca---aattcagtgttcctttttcaaaatgcaacgaccctgaaaatactcgaatgccgta 596
|| | |||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 9542 cacagatcccagtgttcgtttttcaaaatgcaacgaccctgaaaatattcgaatgccgta 9483
Query: 597 tgcacgtgtgtcaagtaggattcaaaccacttagacgaagcactttggcactcaacggca 656
|||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||
Sbjct: 9482 tgcacgtgtgtcaagtaggactcaaagcacttagacgaagcactttggcaatcaacggca 9423
Query: 657 gtccatgtcctgagaccccttccga-gggaaaagcgttcaattcgcatctgaacccttac 715
|||||||| |||||||| ||||||| || |||||||||||||||||||||||||||||||
Sbjct: 9422 gtccatgttctgagacctcttccgatggaaaaagcgttcaattcgcatctgaacccttac 9363
Query: 716 tgccgatgtgttagcataaaaacaaaacagcgtgtttcacacttccagtgctttgtctgt 775
||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 9362 tgccgatgtgttagcat-aaaacaaaacagtgtgtttcacacttccagtgctttgtctgt 9304
Query: 776 gcggaaactaaggaattaacaatcaa 801
||||||||||||||||||||||||||
Sbjct: 9303 gcggaaactaaggaattaacaatcaa 9278
Score = 109 bits (55), Expect = 8e-24
Identities = 79/86 (91%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 796 aatcaagagtttttatatgcagcgtgtaaggttcaatattagggtgtgcaagaacataaa 855
||||||||||||||||||| | | ||||||||||||||||||||||| |||||||||||
Sbjct: 9249 aatcaagagtttttatatgtatcatgtaaggttcaatattagggtgt--aagaacataaa 9192
Query: 856 ccacacccaggtagcggaaaaggaaa 881
|| ||||||||||||||||||||||
Sbjct: 9191 ccgaacccaggtagcggaaaaggaaa 9166
>3x_Contig1803
Length = 52241
Score = 143 bits (72), Expect = 5e-34
Identities = 127/146 (86%)
Strand = Plus / Minus
Query: 5 ccaaacgattgtgggtaatcgtagtggggaccttgaccgttcaaaagggaaaagatggat 64
||||| |||||||||||||||||||| ||||| ||||| ||||||| | ||||||||||
Sbjct: 49841 ccaaaggattgtgggtaatcgtagtgaggaccctgaccattcaaaaacggaaagatggat 49782
Query: 65 tcgtctgtkgtactgttgttgagggcataacagactgtgccgttatcctttgaaatagga 124
| |||| |||||| | ||||| ||||| |||||||| |||||||||||||||||||||
Sbjct: 49781 gcatctgctgtactgcttttgagtgcatagcagactgtaccgttatcctttgaaatagga 49722
Query: 125 gccgcatgggtccctgatagtgataa 150
||||||||| || ||||||||||||
Sbjct: 49721 gccgcatggatcgatgatagtgataa 49696
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5208
Number of Sequences: 1807
Number of extensions: 5208
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 3
length of query: 881
length of database: 10,358,551
effective HSP length: 16
effective length of query: 865
effective length of database: 10,329,639
effective search space: 8935137735
effective search space used: 8935137735
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)